Tissue Detection, Fluorescence, 16bit Tissue Detection, Fluorescence, 16bit

Process APP

Revert

#10199

RUO

Tissue Detection, Fluorescence, 16bit

This Quickstart APP detects and outlines tissue in a 16bit fluorescence image, to get you started on tissue analysis without building from scratch. This is the first step of your analysis pipeline. After tissue detection, use region detection APPs and nuclei/cell detections to create a full analysis pipeline.

Combine different Quickstart APPs to quickly assemble your image analysis.

Figure 1

Figure 1

Detected tissue of a GeoMx® DSP image from Bruker Spatial Biology

Figure 2

Figure 2

Detected TMAs

Figure 3

Figure 3

QPTIFF with detected tissue

Details

Quantitative Output variables

Number of tissue(s)
ROI area in mm²

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